Jatropha Genome Database

JcCB0902161.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0902161
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RLK4_RICCO 179 92.5 98.9 (tr|B9RLK4) Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=3 SV=1
Arabidopsis_pep AT1G69120.1 144 68.8 92.5 | Symbols: AP1, AGL7 | AP1 (APETALA1); DNA binding / protein binding / protein heterodimerization/ transcription activator/ transcription factor | chr1:25982576-25986102 REVERSE
soybean_pep Glyma06g22650.1 152 80.4 91.3  
Medicago_pep IMGA|Medtr8g077590.1 146 73.1 92.5 Transcription factor, MADS-box; Transcription factor, K-box chr08_pseudomolecule_IMGAG_V3 15487044-15481223 E EGN_Mt090430 20090702
grape_pep GSVIVT01012250001 160 80.6 95.7  
castor_bean_cds 30138.m003939 361 91.4 91.4 mads box protein, putative
castor_bean_pep 30138.m003939 179 92.5 98.9 mads box protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0902161.10 length: 93 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 4.4e-27 13-93
ProfileScan PS51297 K_BOX 14.396 26-93
no_ID  
Coil coil coiled-coil NA 63-84
HMMPanther PTHR11945 MADS 1e-25 1-93
HMMPanther PTHR11945:SF19 MADS 1e-25 1-93