Jatropha Genome Database

JcCB0892281.10 (JcS_100044.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0892281
Scaffold:
JcS_100044 JcCB0760911(+) =JcCB0892281(+) =JcPR03BRZWZ(+) =JcCA0279321(+) =JcCA0259681(-) =JcCB0434201(-) =JcCB0411911(+) =JcCA0128121(-) =JcCB0013521(-) =JcCB0463071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BX90_VITVI 112 78.3 86.7 (tr|A5BX90) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004748 PE=4 SV=1
Arabidopsis_pep AT3G12680.1 71.2 54.0 71.4 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA binding | chr3:4025276-4028999 REVERSE
soybean_pep Glyma08g25050.1 91.3 64.6 75.4  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01036686001 105 78.3 86.7  
castor_bean_cds 29593.m000174 176 88.8 88.8 conserved hypothetical protein
castor_bean_pep 29593.m000174 104 75.0 85.9 conserved hypothetical protein
JAT_13201ests gi|268520189|gb|FM890037.1|FM890037 238 100.0 100.0 FM890037 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003825, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0892281.10 length: 79 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00642 zf-CCCH 0.00012 4-16