Jatropha Genome Database

JcCB0843901.10 (JcS_200268.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0843901
Scaffold:
JcS_200268 JcCB0459051(+) =JcCA0151751(-) =JcCB0498421(-) =JcCB0843901(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B2WQB4_9ROSI 298 100.0 100.0 (tr|B2WQB4) Aquaporin OS=Jatropha curcas PE=2 SV=1
Arabidopsis_pep AT4G35100.1 275 90.3 94.5 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | chr4:16708672-16709958 FORWARD
soybean_pep Glyma04g00450.1 276 92.4 96.6  
Medicago_pep IMGA|Medtr3g163530.1 276 92.4 97.2 Major intrinsic protein chr03_pseudomolecule_IMGAG_V3 42984188-42985232 E EGN_Mt090430 20090702
grape_pep GSVIVT01024010001 278 93.8 96.6  
castor_bean_cds 29869.m001194 375 85.9 85.9 Aquaporin PIP2.7, putative
castor_bean_pep 29869.m001194 286 95.9 97.9 Aquaporin PIP2.7, putative
JAT_13201ests gi|268522648|gb|FM896689.1|FM896689 765 98.8 98.8 FM896689 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003965, mRNA sequence
KJC_r1 KJC_c00035 866 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0843901.10 length: 175 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.9e-34 21-40
70-88
106-128
Gene3D G3DSA:1.20.1080.10 no description 3.8e-35 1-145
HMMPanther PTHR19139 AQUAPORIN 1.4e-111 1-145
HMMPfam PF00230 MIP 1.7e-53 1-146
PatternScan PS00221 MIP NA 2-10
superfamily SSF81338 Aquaporin-like 1.4e-35 1-138
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 1.4e-111 1-145