Jatropha Genome Database

JcCB0824821.10 (JcS_100108.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0824821
Scaffold:
JcS_100108 JcCD0183258(+) =JcCB0453831(-) =JcCB0080951(+) =JcCB0078661(-) =JcCB0336251(-) =JcCA0307531(+) =JcCB0569231(-) =JcPR11GWW51(-) =JcCB0824821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SEL3_RICCO 201 79.7 88.1 (tr|B9SEL3) Transcription initiation factor ia, putative OS=Ricinus communis GN=RCOM_0970060 PE=4 SV=1
Arabidopsis_pep AT2G34750.1 156 62.4 76.9 | Symbols: | RNA polymerase I specific transcription initiation factor RRN3 family protein | chr2:14660449-14663792 REVERSE
soybean_pep Glyma16g21590.2 178 68.4 82.9  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01026448001 186 78.8 85.6  
castor_bean_cds 29866.m000624 252 83.9 83.9 transcription initiation factor ia, putative
castor_bean_pep 29866.m000624 201 79.7 88.1 transcription initiation factor ia, putative
JAT_13201ests gi|268523428|gb|FM893751.1|FM893751 331 97.3 97.3 FM893751 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004662, mRNA sequence
KJC_r1 KJC_c00388 682 99.4 99.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0824821.10 length: 135 aa.
IPR007991 RNA polymerase I specific transcription initiation factor RRN3
method AccNumber shortName E-value location
HMMPanther PTHR12790 TRANSCRIPTION 1e-33 9-135
HMMPfam PF05327 RRN3 2.6e-30 12-129