Jatropha Genome Database

JcCB0776371.10 (JcS_100039.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0776371
Scaffold:
JcS_100039 JcCB0487041(+) =JcCB0776371(-) =JcCD0163958(+) =JcCA0241461(-) =JcCB1001131(-) =JcCB0642181(+) =JcCA0292971(+) =JcCA0287971(+) =JcCB0076151(-) =JcCB0104751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H981_POPTR 318 91.0 95.8 (tr|B9H981) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_416299 PE=3 SV=1
Arabidopsis_pep AT5G56680.1 305 84.9 94.6 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | SYNC1; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / nucleotide binding | chr5:22936645-22938841 FORWARD
soybean_pep Glyma08g03500.1 297 84.3 92.2  
Medicago_pep IMGA|Medtr4g160420.1 291 81.9 92.8 tRNA synthetase, class II (D, K and N); S15/NS1, RNA-binding chr04_pseudomolecule_IMGAG_V3 40657904-40652732 E EGN_Mt090430 20090702
grape_pep GSVIVT01015254001 310 88.0 96.4  
castor_bean_cds 29912.m005417 507 89.5 89.5 aspartyl-tRNA synthetase, putative
castor_bean_pep 29912.m005417 318 90.4 95.8 aspartyl-tRNA synthetase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00746 975 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0776371.10 length: 167 aa.
IPR002312 Aspartyl-tRNA synthetase, class IIb
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004815 aspartate-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006422 aspartyl-tRNA aminoacylation    
FPrintScan PR01042 TRNASYNTHASP 1.3e-05 82-98
122-136
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 9.5e-33 5-160
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 1.8e-64 6-164
no_ID  
Gene3D G3DSA:3.30.930.10 no description 4.8e-43 6-167
HMMPanther PTHR22594:SF6 ASPARTYL-TRNA 1.8e-64 6-164
superfamily SSF55681 Class 9.8e-53 6-163