| JcS_100017 | JcCB0444641(-) =JcCB0762541(-) =JcCB0421491(-) =JcCB0795211(+) =JcCA0305361(+) =JcCB0484021(-) =JcCB0353721(-) =JcCB0700081(-) =JcCB0155391(-) =JcCB0216421(-) =JcCD0049927(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9MX89_POPTR | 133 | 93.9 | 98.5 | (tr|B9MX89) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_424268 PE=4 SV=1 |
| Arabidopsis_pep | AT4G35785.3 | 114 | 76.9 | 92.3 | | Symbols: | nucleic acid binding / nucleotide binding | chr4:16953708-16955127 REVERSE |
| soybean_pep | Glyma01g36670.1 | 124 | 85.3 | 92.6 | |
| Medicago_pep | IMGA|Medtr8g088990.1 | 125 | 85.3 | 94.1 | RNA-binding region RNP-1 (RNA recognition motif) chr08_pseudomolecule_IMGAG_V3 19026674-19029671 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01005197001 | 125 | 85.3 | 92.6 | |
| castor_bean_cds | 29784.m000370 | 244 | 91.5 | 91.5 | Arginine/serine-rich-splicing factor, putative |
| castor_bean_pep | 29784.m000370 | 132 | 91.2 | 97.1 | Arginine/serine-rich-splicing factor, putative |
| JAT_13201ests | gi|268524423|gb|FM895103.1|FM895103 | 228 | 98.5 | 98.5 | FM895103 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001672, mRNA sequence |
| KJC_r1 | KJC_c09920 | 400 | 99.5 | 99.5 |
| JcCB0762541.10 | length: 69 aa. | |||
| IPR000504 | RNA recognition motif, RNP-1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 2.2e-16 | 10-69 |
| HMMSmart | SM00360 | no description | 8.2e-09 | 9-69 |
| ProfileScan | PS50102 | RRM | 14.215 | 8-69 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 4.5e-18 | 1-69 |
| no_ID | ||||
| HMMPanther | PTHR15241 | TRANSFORMER-2-RELATED | 2.8e-26 | 4-69 |
| superfamily | SSF54928 | RNA-binding | 1.9e-17 | 1-69 |