Jatropha Genome Database

JcCB0733251.10 (JcS_100234.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0733251
Scaffold:
JcS_100234 JcCA0296331(-) =JcCB0468081(+) =JcCA0028701(-) =JcCB0733251(-) =JcCA0152411(+) =JcCB0577931(+) =JcCA0145031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5C449_VITVI 147 60.2 71.7 (tr|A5C449) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036193 PE=4 SV=1
Arabidopsis_pep AT3G01460.1 47.4 32.5 44.2 | Symbols: MBD9, ATMBD9 | MBD9; DNA binding / methyl-CpG binding | chr3:173316-182038 FORWARD
soybean_pep Glyma10g01740.1 139 59.0 69.5  
Medicago_pep IMGA|Medtr1g107030.1 142 57.3 69.2 BRCT; Zinc finger, FYVE/PHD-type chr01_pseudomolecule_IMGAG_V3 22500941-22493346 E EGN_Mt090430 20090702
grape_pep GSVIVT01028102001 144 60.9 72.7  
castor_bean_cds 30076.m004677 159 88.9 88.9 DNA replication regulator dpb11, putative
castor_bean_pep 29631.m001003 50.8 28.6 43.8 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0733251.10 length: 162 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 no description 4.1e-06 86-138
IPR011011 Zinc finger, FYVE/PHD-type
Molecular Function GO:0008270 zinc ion binding    
superfamily SSF57903 FYVE/PHD 5.2e-12 79-145
IPR019787 Zinc finger, PHD-finger
HMMPfam PF00628 PHD 7e-10 87-138
ProfileScan PS50016 ZF_PHD_2 8.974 84-140
no_ID  
Gene3D G3DSA:3.30.40.10 no description 7.4e-10 85-141
HMMPanther PTHR14140 NUCLEAR 4.9e-09 86-137
HMMPanther PTHR14140:SF2 UBIQUITIN-LIKE, 4.9e-09 86-137
Seg seg seg NA 138-146