Jatropha Genome Database

JcCB0696171.10 (JcS_100780.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0696171
Scaffold:
JcS_100780 JcCA0118941(-) =JcCA0154561(-) =JcCB0696171(-) =JcCA0313951(-) =JcCD0149462(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RJC2_RICCO 100 64.9 70.3 (tr|B9RJC2) Vacuolar protein sorting-associated protein VPS9, putative OS=Ricinus communis GN=RCOM_1033030 PE=4 SV=1
Arabidopsis_pep AT3G19770.1 98.6 64.9 68.9 | Symbols: ATVPS9A, VPS9A | VPS9A; Rho guanyl-nucleotide exchange factor | chr3:6866916-6869114 FORWARD
soybean_pep Glyma04g43330.1 99.8 64.9 70.3  
Medicago_pep IMGA|Medtr3g010530.1 67.8 54.8 67.7 Vacuolar sorting protein 9 chr03_pseudomolecule_IMGAG_V3 1862449-1865027 H EGN_Mt090430 20090702
grape_pep GSVIVT01008947001 96.7 75.0 78.3  
castor_bean_cds 29908.m006221 256 92.8 92.8 Vacuolar protein sorting-associated protein VPS9, putative
castor_bean_pep 29908.m006221 100 64.9 70.3 Vacuolar protein sorting-associated protein VPS9, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0696171.10 length: 82 aa.
IPR003123 Vacuolar sorting protein 9
method AccNumber shortName E-value location
HMMPfam PF02204 VPS9 6.2e-17 2-67
ProfileScan PS51205 VPS9 21.960 1-82
IPR013995 Vacuolar sorting protein 9, subgroup
HMMSmart SM00167 no description 0.00039 1-82
no_ID  
HMMPanther PTHR23101 RAB 1.9e-27 1-74
Seg seg seg NA 29-41
superfamily SSF109993 VPS9 1.4e-17 1-77