Jatropha Genome Database

JcCB0695691.10 (JcS_100536.70)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0695691
Scaffold:
JcS_100536 JcCB0205061(+) =JcCA0064101(-) =JcPR01DAKSA(+) =JcCB0340161(-) =JcCB0695691(-) =JcCB0890131(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RF68_RICCO 138 89.6 98.5 (tr|B9RF68) DNA polymerase OS=Ricinus communis GN=RCOM_1431670 PE=3 SV=1
Arabidopsis_pep AT1G67500.1 115 59.8 75.0 | Symbols: ATREV3 | ATREV3 (ARABIDOPSIS THALIANA RECOVERY PROTEIN 3); DNA binding / DNA-directed DNA polymerase | chr1:25287707-25296714 REVERSE
soybean_pep Glyma03g39720.1 133 70.3 80.2  
Medicago_pep IMGA|Medtr7g139150.1 102 58.2 68.1 DNA-directed DNA polymerase B chr07_pseudomolecule_IMGAG_V3 33216582-33210461 H EGN_Mt090430 20090702
grape_pep GSVIVT01000087001 135 67.4 82.1  
castor_bean_cds 30128.m008782 297 91.9 91.9 DNA polymerase zeta catalytic subunit, putative
castor_bean_pep 30128.m008782 138 89.6 98.5 DNA polymerase zeta catalytic subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0695691.10 length: 117 aa.
IPR006172 DNA-directed DNA polymerase, family B
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process    
HMMPanther PTHR10322 DNA 1.2e-28 30-117
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 5.4e-07 50-117
no_ID  
HMMPanther PTHR10322:SF5 DNA 1.2e-28 30-117
Seg seg seg NA 39-50