Jatropha Genome Database

JcCB0693601.10 (JcS_202338.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0693601
Scaffold:
JcS_202338 JcCB0693601(-) =JcCB0462761(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RLB5_RICCO 523 80.8 89.5 (tr|B9RLB5) S-adenosylmethionine decarboxylase, putative OS=Ricinus communis GN=RCOM_1464770 PE=1 SV=1
Arabidopsis_pep AT3G25570.1 434 67.4 79.6 | Symbols: | adenosylmethionine decarboxylase family protein | chr3:9287413-9288462 REVERSE
soybean_pep Glyma02g14180.1 465 70.6 82.1  
Medicago_pep IMGA|Medtr8g140130.1 218 41.0 57.4 S-adenosylmethionine decarboxylase chr08_pseudomolecule_IMGAG_V3 34332981-34331643 E EGN_Mt090430 20090702
grape_pep GSVIVT01017856001 184 44.1 53.2  
castor_bean_cds 30138.m003848 833 86.0 86.0 s-adenosylmethionine decarboxylase, putative
castor_bean_pep 30138.m003848 523 80.8 89.5 s-adenosylmethionine decarboxylase, putative
JAT_13201ests gi|268524789|gb|FM895487.1|FM895487 1031 99.4 99.4 FM895487 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002417, mRNA sequence
KJC_r1 KJC_c01321 1265 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0693601.10 length: 333 aa.
IPR001985 S-adenosylmethionine decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0006597 spermine biosynthetic process    
Biological Process GO:0008295 spermidine biosynthetic process    
HMMPanther PTHR11570 S-ADENOSYLMETHIONINE 2e-127 4-301
HMMPfam PF01536 SAM_decarbox 5e-135 4-319
IPR016067 S-adenosylmethionine decarboxylase, core
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0008295 spermidine biosynthetic process    
Gene3D G3DSA:3.60.90.10 no description 2.6e-115 2-324
superfamily SSF56276 S-adenosylmethionine 1.6e-129 11-328
IPR018166 S-adenosylmethionine decarboxylase, conserved site
PatternScan PS01336 ADOMETDC NA 63-73
IPR018167 S-adenosylmethionine decarboxylase subgroup
HMMPIR PIRSF001355 S-adenosylmethionine 7.6e-115 1-333
HMMTigr TIGR00535 SAM_DCase: 5.4e-138 8-333
no_ID  
Seg seg seg NA 85-98
314-326