Jatropha Genome Database

JcCB0691491.10 (JcS_102554.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0691491
Scaffold:
JcS_102554 JcCB0691491(+) =JcCB0400041(+) =JcCB0340941(+) =JcCA0271581(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SFB9_RICCO 691 77.4 87.1 (tr|B9SFB9) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1096010 PE=4 SV=1
Arabidopsis_pep AT1G61350.1 473 60.5 76.1 | Symbols: | armadillo/beta-catenin repeat family protein | chr1:22634099-22635820 FORWARD
soybean_pep Glyma08g06400.1 541 62.9 80.5  
Medicago_pep IMGA|Medtr4g124890.1 524 62.8 80.6 Armadillo chr04_pseudomolecule_IMGAG_V3 29326703-29324527 E EGN_Mt090430 20090702
grape_pep GSVIVT01003182001 454 68.8 83.0  
castor_bean_cds 29933.m001430 848 83.5 83.5 ubiquitin-protein ligase, putative
castor_bean_pep 29933.m001430 691 77.4 87.1 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0691491.10 length: 464 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
HMMSmart SM00185 no description 0.0007 208-249
250-290
291-333
334-374
376-419
ProfileScan PS50176 ARM_REPEAT 10.097 302-346
IPR011989 Armadillo-like helical
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.10.10 no description 8.5e-42 193-463
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 9.2e-46 150-464
no_ID  
HMMPanther PTHR23315 BETA 7.5e-11 181-416
HMMPanther PTHR23315:SF7 ANKYRIN-REPEAT-ARM 7.5e-11 181-416
Seg seg seg NA 32-42