Jatropha Genome Database

JcCB0689591.10 (JcS_100203.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0689591
Scaffold:
JcS_100203 JcCD0096881(+) =JcCA0015332(-) =JcCB0689591(+) =JcCB0013291(+) =JcCB0227251(-) =JcCB0400871(+) =JcCA0141551(+) =JcCA0236591(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HIN1_POPTR 294 72.6 84.4 (tr|B9HIN1) Pectinesterase OS=Populus trichocarpa GN=POPTRDRAFT_874401 PE=3 SV=1
Arabidopsis_pep AT3G17060.1 252 63.6 73.8 | Symbols: | pectinesterase family protein | chr3:5816953-5818458 REVERSE
soybean_pep Glyma09g03960.1 261 64.2 78.1  
Medicago_pep IMGA|Medtr2g038030.1 248 66.3 79.7 Pectinesterase chr02_pseudomolecule_IMGAG_V3 10588737-10590709 E EGN_Mt090430 20090702
grape_pep GSVIVT01034985001 269 66.3 80.2  
castor_bean_cds 29748.m000380 305 83.1 83.1 Pectinesterase-2 precursor, putative
castor_bean_pep 29748.m000380 290 72.0 82.3 Pectinesterase-2 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0689591.10 length: 231 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 5.8e-41 44-224
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.6e-40 46-231
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 3.5e-50 46-230
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 102-111
no_ID  
Seg seg seg NA 148-159