Jatropha Genome Database

JcCB0684261.10 (JcS_100835.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0684261
Scaffold:
JcS_100835 JcCA0206521(-) =JcCB0121571(+) =JcCB0118411(-) =JcCB0684261(-) =JcCB0148811(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5C9X9_VITVI 513 61.2 76.8 (tr|A5C9X9) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027568 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 222 33.7 53.3 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g21320.1 394 48.3 66.2  
Medicago_pep IMGA|Medtr4g080020.1 257 33.7 53.6 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01028612001 299 55.1 69.1  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0684261.10 length: 1028 aa.
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 4.7e-08 195-257
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
HMMPfam PF07727 RVT_2 1.9e-48 634-787
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 4.9e-227 9-1027
Seg seg seg NA 455-479
916-930
superfamily SSF56672 DNA/RNA 6.4e-14 650-979