Jatropha Genome Database

JcCB0669741.10 (JcS_108778.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0669741
Scaffold:
JcS_108778 JcCB0186071(-) =JcCB0669741(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RJW8_RICCO 138 83.8 95.0 (tr|B9RJW8) Mads box protein, putative OS=Ricinus communis GN=RCOM_1039400 PE=4 SV=1
Arabidopsis_pep AT2G22540.1 117 69.1 92.6 | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE); transcription factor/ translation repressor, nucleic acid binding | chr2:9580417-9583603 FORWARD
soybean_pep Glyma02g04710.2 112 69.1 88.9  
Medicago_pep IMGA|Medtr5g033820.1 110 71.6 87.7 Transcription factor, MADS-box; Transcription factor, K-box chr05_pseudomolecule_IMGAG_V3 13797730-13788961 E EGN_Mt090430 20090702
grape_pep GSVIVT01009171001 127 73.8 92.5  
castor_bean_cds 29908.m006257 208 86.7 86.7 mads box protein, putative
castor_bean_pep 29908.m006257 138 83.8 95.0 mads box protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c08529 280 89.6 89.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0669741.10 length: 92 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 6.9e-10 25-81
ProfileScan PS51297 K_BOX 9.102 25-92
no_ID  
Coil coil coiled-coil NA 32-53
HMMPanther PTHR11945 MADS 1.3e-08 1-80