Jatropha Genome Database

JcCB0619401.10 (JcS_108078.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0619401
Scaffold:
JcS_108078 JcCA0078521(-) =JcCB0619401(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9ZRJ0_TOBAC 791 65.5 80.5 (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1
Arabidopsis_pep AT4G23160.1 304 34.9 56.3 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma06g18690.1 511 47.6 65.2  
Medicago_pep IMGA|Medtr5g048830.1 326 37.3 56.4 Polynucleotidyl transferase, Ribonuclease H fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H EGN_Mt090430 20090702
grape_pep GSVIVT01009548001 166 36.6 58.1  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0619401.10 length: 598 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 2.7e-91 114-346
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 4.9e-226 38-578
superfamily SSF56672 DNA/RNA 9.4e-20 113-545