Jatropha Genome Database

JcCB0603701.10 (JcS_105249.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0603701
Scaffold:
JcS_105249 JcCB0603701(-) =JcCB0280701(+) =JcCB0239191(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S545_RICCO 218 74.5 87.6 (tr|B9S545) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1721260 PE=4 SV=1
Arabidopsis_pep AT5G48850.1 147 57.6 76.3 | Symbols: ATSDI1 | ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1); binding | chr5:19805576-19807699 REVERSE
soybean_pep Glyma18g38050.1 193 64.0 81.6  
Medicago_pep IMGA|Medtr7g064920.1 191 64.0 81.6 Tetratricopeptide-like helical chr07_pseudomolecule_IMGAG_V3 13225956-13220702 E EGN_Mt090430 20090702
grape_pep GSVIVT01028566001 184 64.2 80.3  
castor_bean_cds 30204.m001780 178 80.7 80.7 conserved hypothetical protein
castor_bean_pep 30204.m001780 218 74.5 87.6 conserved hypothetical protein
JAT_13201ests gi|268523745|gb|FM892278.1|FM892278 446 98.1 98.1 FM892278 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002793, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0603701.10 length: 136 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
HMMPfam PF00515 TPR_1 0.00016 2-29
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.40.10 no description 0.00075 2-58
IPR013026 Tetratricopeptide repeat-containing
ProfileScan PS50293 TPR_REGION 8.924 1-30
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 0.00072 3-58
HMMPanther PTHR23083:SF18 TETRATRICOPEPTIDE 0.00072 3-58
superfamily SSF48452 TPR-like 4.5e-08 2-58