Jatropha Genome Database

JcCB0587121.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0587121
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RE39_RICCO 205 48.9 57.3 (tr|B9RE39) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1617860 PE=4 SV=1
Arabidopsis_pep AT1G68800.1 82.8 64.4 81.4 | Symbols: BRC2, TCP12 | TCP12 (TCP DOMAIN PROTEIN 12); transcription factor | chr1:25847306-25848471 REVERSE
soybean_pep Glyma17g13060.1 95.5 31.0 45.9  
Medicago_pep IMGA|Medtr2g132520.1 68.6 57.1 81.6 TCP transcription factor chr02_pseudomolecule_IMGAG_V3 32076074-32073489 E EGN_Mt090430 20090702
grape_pep GSVIVT01008234001 146 41.8 52.1  
castor_bean_cds 30174.m008721 127 89.3 89.3 conserved hypothetical protein
castor_bean_pep 30174.m008721 205 48.9 57.3 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0587121.10 length: 258 aa.
IPR005333 Transcription factor, TCP
method AccNumber shortName E-value location
HMMPfam PF03634 TCP 6.8e-32 1-142
IPR017887 Transcription factor TCP subgroup
ProfileScan PS51369 TCP 28.132 1-49
IPR017888 CYC/TB1, R domain
ProfileScan PS51370 R 11.859 120-137
no_ID  
Seg seg seg NA 58-76
119-136