Jatropha Genome Database

JcCB0585631.10 (JcS_105572.50)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0585631
Scaffold:
JcS_105572 JcCB0079621(+) =JcCB0075281(+) =JcCB0585631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SW84_RICCO 193 69.6 73.0 (tr|B9SW84) Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0075460 PE=3 SV=1
Arabidopsis_pep AT1G20920.1 157 57.4 68.2 | Symbols: | DEAD box RNA helicase, putative | chr1:7285342-7288842 FORWARD
soybean_pep Glyma01g43960.2 177 62.2 70.9  
Medicago_pep IMGA|Medtr2g007080.1 176 63.5 70.3 Helicase, C-terminal; ; chr02_pseudomolecule_IMGAG_V3 957151-962448 E EGN_Mt090430 20090702
grape_pep GSVIVT01028137001 68.6 47.6 68.3  
castor_bean_cds 27758.m000324 509 85.1 85.1 dead box ATP-dependent RNA helicase, putative
castor_bean_pep 27758.m000324 193 69.6 73.0 dead box ATP-dependent RNA helicase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0585631.10 length: 304 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10967 DEAD 1.1e-09 256-304
HMMPanther PTHR10967:SF45 DEAD 1.1e-09 256-304
Seg seg seg NA 46-68
181-192
222-237