| JcS_100521 | JcCB0168061(+) =JcCB0265081(+) =JcCB0061481(-) =JcCA0097961(+) =JcCB0580021(+) =JcCB0693041(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9HEU4_POPTR | 185 | 81.4 | 85.8 | (tr|B9HEU4) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_719459 PE=4 SV=1 |
| Arabidopsis_pep | AT1G60900.1 | 179 | 73.5 | 87.6 | | Symbols: | U2 snRNP auxiliary factor large subunit, putative | chr1:22424008-22427806 FORWARD |
| soybean_pep | Glyma04g43500.1 | 172 | 73.7 | 85.1 | |
| Medicago_pep | IMGA|Medtr3g013160.2 | 176 | 71.9 | 86.8 | Nucleotide-binding, alpha-beta plait chr03_pseudomolecule_IMGAG_V3 2411504-2404739 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018993001 | 182 | 78.1 | 85.1 | |
| castor_bean_cds | 29646.m001075 | 125 | 86.7 | 86.7 | splicing factor u2af large subunit, putative |
| castor_bean_pep | 29646.m001075 | 86.7 | 90.9 | 95.5 | splicing factor u2af large subunit, putative |
| JAT_13201ests | gi|268522655|gb|FM896696.1|FM896696 | 557 | 99.7 | 99.7 | FM896696 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003975, mRNA sequence |
| KJC_r1 | KJC_c03683 | 168 | 100.0 | 100.0 |
| JcCB0580021.10 | length: 112 aa. | |||
| IPR000504 | RNA recognition motif, RNP-1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 1.7e-05 | 42-95 |
| ProfileScan | PS50102 | RRM | 9.149 | 1-103 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 1.9e-32 | 7-111 |
| no_ID | ||||
| HMMPanther | PTHR23139 | RNA-BINDING | 1.6e-44 | 1-107 |
| HMMPanther | PTHR23139:SF9 | SPLICING | 1.6e-44 | 1-107 |
| superfamily | SSF54928 | RNA-binding | 1e-10 | 30-111 |