Jatropha Genome Database

JcCB0578941.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0578941
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T6Z9_RICCO 153 57.8 66.7 (tr|B9T6Z9) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1143570 PE=4 SV=1
Arabidopsis_pep AT3G17860.2 65.5 34.4 42.5 | Symbols: TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3) | chr3:6121083-6122691 FORWARD
soybean_pep Glyma05g34960.2 117 49.0 57.8  
Medicago_pep IMGA|AC233676_12.3 100 44.0 57.3 ZIM AC233676.2 46780-50846 E EGN_Mt090430 20090702
grape_pep GSVIVT01011679001 141 55.1 64.6  
castor_bean_cds 29962.m000052 313 83.8 83.8 conserved hypothetical protein
castor_bean_pep 29962.m000052 153 57.8 66.7 conserved hypothetical protein
JAT_13201ests gi|268523821|gb|FM890507.1|FM890507 250 97.9 97.9 FM890507 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000178, mRNA sequence
KJC_r1 KJC_c01262 287 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0578941.10 length: 179 aa.
IPR010399 Tify
method AccNumber shortName E-value location
HMMPfam PF06200 tify 4.5e-08 36-59
IPR018467 CCT domain-like
HMMPfam PF09425 CCT_2 3.4e-08 163-179
no_ID  
Seg seg seg NA 92-122