Jatropha Genome Database

JcCB0575821.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0575821
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RZK5_RICCO 358 90.8 95.7 (tr|B9RZK5) Sensor histidine kinase, putative OS=Ricinus communis GN=RCOM_0999330 PE=4 SV=1
Arabidopsis_pep AT4G16110.1 265 71.2 80.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR 2); transcription factor/ two-component response regulator | chr4:9112979-9115785 FORWARD
soybean_pep Glyma07g37220.1 341 85.9 93.0  
Medicago_pep IMGA|Medtr3g138060.1 208 68.9 86.4 Myb, DNA-binding; Response regulator receiver; Response regulator, RegA/PrrA/ActR type; Homeodomain-related chr03_pseudomolecule_IMGAG_V3 35178774-35183412 F EGN_Mt090430 20090702
grape_pep GSVIVT01035051001 343 87.6 94.1  
castor_bean_cds 29889.m003245 505 86.5 86.5 sensor histidine kinase, putative
castor_bean_pep 29889.m003245 358 90.8 95.7 sensor histidine kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04504 1084 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0575821.10 length: 185 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.5e-23 35-143
HMMSmart SM00448 no description 3.6e-30 33-145
ProfileScan PS50110 RESPONSE_REGULATORY 31.676 34-149
IPR011006 CheY-like
superfamily SSF52172 CheY-like 1.4e-34 32-150
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 3.1e-29 33-185
HMMPanther PTHR23283 SENSOR 5.2e-19 33-153
HMMPanther PTHR23283:SF31 SENSOR 5.2e-19 33-153