Jatropha Genome Database

JcCB0569561.10 (JcS_202195.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0569561
Scaffold:
JcS_202195 JcCB0569561(-) =JcCB0398801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SZ69_RICCO 158 97.3 100.0 (tr|B9SZ69) Auxin-responsive protein IAA16, putative OS=Ricinus communis GN=RCOM_0484470 PE=4 SV=1
Arabidopsis_pep AT3G04730.1 153 93.3 98.7 | Symbols: IAA16 | IAA16; transcription factor | chr3:1288993-1290415 REVERSE
soybean_pep Glyma03g40760.1 155 94.7 98.7  
Medicago_pep IMGA|Medtr1g117600.1 149 90.7 96.0 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3 25280071-25283234 E EGN_Mt090430 20090702
grape_pep GSVIVT01036283001 154 96.0 100.0  
castor_bean_cds 29598.m000460 272 90.5 90.5 Auxin-responsive protein IAA16, putative
castor_bean_pep 29598.m000460 158 97.3 100.0 Auxin-responsive protein IAA16, putative
JAT_13201ests gi|262090677|gb|GT229035.1|GT229035 65.9 84.3 84.3 JC600 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL13SE.D12.scf 5', mRNA sequence
KJC_r1 KJC_c00598 448 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0569561.10 length: 75 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 18.227 1-58
no_ID  
HMMPfam PF02309 AUX_IAA 1.3e-37 5-67