Jatropha Genome Database

JcCB0569231.10 (JcS_100108.80)   /short
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0569231
Scaffold:
JcS_100108 JcCD0183258(+) =JcCB0453831(-) =JcCB0080951(+) =JcCB0078661(-) =JcCB0336251(-) =JcCA0307531(+) =JcCB0569231(-) =JcPR11GWW51(-) =JcCB0824821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SEL3_RICCO 70.1 73.8 88.1 (tr|B9SEL3) Transcription initiation factor ia, putative OS=Ricinus communis GN=RCOM_0970060 PE=4 SV=1
Arabidopsis_pep AT2G34750.1 57.4 57.1 78.6 | Symbols: | RNA polymerase I specific transcription initiation factor RRN3 family protein | chr2:14660449-14663792 REVERSE
soybean_pep Glyma09g32870.2 59.3 64.3 76.2  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01026448001 61.2 66.7 81.0  
castor_bean_cds 29866.m000624 50.1 91.9 91.9 transcription initiation factor ia, putative
castor_bean_pep 29866.m000624 70.1 73.8 88.1 transcription initiation factor ia, putative
JAT_13201ests gi|268523428|gb|FM893751.1|FM893751 186 95.2 95.2 FM893751 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004662, mRNA sequence
KJC_r1 KJC_c00388 222 97.6 97.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0569231.10 length: 42 aa.
IPR007991 RNA polymerase I specific transcription initiation factor RRN3
method AccNumber shortName E-value location
HMMPanther PTHR12790 TRANSCRIPTION 0.00051 1-42
HMMPfam PF05327 RRN3 3.3e-07 1-42