Jatropha Genome Database

JcCB0551561.10 (JcS_106760.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0551561
Scaffold:
JcS_106760 JcCA0216521(+) =JcCB0551561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SNY5_RICCO 671 81.9 86.2 (tr|B9SNY5) Auxin efflux carrier component, putative (Fragment) OS=Ricinus communis GN=RCOM_0583560 PE=4 SV=1
Arabidopsis_pep AT5G57090.1 583 73.3 81.1 | Symbols: EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1 | EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin efflux transmembrane transporter/ auxin:hydrogen symporter/ transporter | chr5:23100765-23104456 FORWARD
soybean_pep Glyma13g00390.1 660 81.2 86.9  
Medicago_pep IMGA|Medtr8g130020.1 617 78.9 84.6 Auxin Efflux Carrier chr08_pseudomolecule_IMGAG_V3 30912990-30910383 E EGN_Mt090430 20090702
grape_pep GSVIVT01025749001 403 64.4 76.2  
castor_bean_cds 29662.m000472 676 85.4 85.4 Auxin efflux carrier component, putative
castor_bean_pep 29662.m000472 671 81.9 86.2 Auxin efflux carrier component, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0551561.10 length: 416 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 2.9e-93 10-254
IPR014024 Auxin efflux carrier, subgroup
HMMTigr TIGR00946 2a69: 2e-144 1-415
no_ID  
Seg seg seg NA 204-217