Jatropha Genome Database

JcCB0550651.10 (JcS_100401.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0550651
Scaffold:
JcS_100401 JcCA0139851(-) =JcCB0492621(-) =JcCB0318551(-) =JcCB0550651(-) =JcCA0060621(+) =JcPR01E1J32(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SQS5_RICCO 182 94.5 100.0 (tr|B9SQS5) 3-isopropylmalate dehydratase, putative OS=Ricinus communis GN=RCOM_1217310 PE=4 SV=1
Arabidopsis_pep AT4G13430.1 159 79.1 93.4 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
soybean_pep Glyma17g37540.1 177 93.4 97.8  
Medicago_pep IMGA|Medtr1g065760.1 174 91.2 96.7 Cis-homoaconitase; ; ; chr01_pseudomolecule_IMGAG_V3 13193763-13202569 E EGN_Mt090430 20090702
grape_pep GSVIVT01027922001 176 92.3 97.8  
castor_bean_cds 30008.m000797 365 92.2 92.2 3-isopropylmalate dehydratase, putative
castor_bean_pep 30008.m000797 182 94.5 100.0 3-isopropylmalate dehydratase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01322 541 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0550651.10 length: 91 aa.
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
FPrintScan PR00415 ACONITASE 6e-05 34-47
48-61
HMMPfam PF00330 Aconitase 6.5e-24 2-86
superfamily SSF53732 Aconitase 2.8e-26 1-83
IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.1060.10 no description 4.5e-23 5-85
IPR015936 Homoaconitase/3-isopropylmalate dehydratase, small/large subunit
Biological Process GO:0008652 cellular amino acid biosynthetic process    
Molecular Function GO:0016836 hydro-lyase activity    
HMMPanther PTHR11670:SF6 3-ISOPROPYLMALATE 2.6e-37 1-89
IPR015937 Aconitase-like core
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11670 ACONITASE 2.6e-37 1-89