Jatropha Genome Database

JcCB0546951.10 (JcS_102435.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0546951
Scaffold:
JcS_102435 JcCB0546951(+) =JcCB0184991(-) =JcCB0500111(-) =JcCB0604411(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7SLB4_VITVI 301 75.1 83.8 (tr|D7SLB4) Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025344001 PE=4 SV=1
Arabidopsis_pep AT5G42260.1 259 64.9 75.7 | Symbols: BGLU12 | BGLU12 (BETA GLUCOSIDASE 12); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:16898712-16900235 FORWARD
soybean_pep Glyma11g13800.1 295 72.4 82.7  
Medicago_pep IMGA|Medtr4g024200.1 251 62.7 75.1 Glycoside hydrolase, family 1 chr04_pseudomolecule_IMGAG_V3 5475901-5481570 E EGN_Mt090430 20090702
grape_pep GSVIVT01025344001 301 75.1 83.8  
castor_bean_cds 30169.m006385 287 84.9 84.9 beta-glucosidase, putative
castor_bean_pep 30169.m006385 299 75.1 83.8 beta-glucosidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0546951.10 length: 188 aa.
IPR001360 Glycoside hydrolase, family 1
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPanther PTHR10353 GLYCOSIDE 3.9e-130 4-188
HMMPfam PF00232 Glyco_hydro_1 3.4e-75 3-188
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 2.2e-78 7-188
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 1.4e-81 4-186
no_ID  
HMMPanther PTHR10353:SF6 BETA-GLUCOSIDASE 3.9e-130 4-188
Seg seg seg NA 169-179