Jatropha Genome Database

JcCB0545461.10 (JcS_100001.180)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0545461
Scaffold:
JcS_100001 JcCB0130751(-) =JcCA0312871(-) =JcCB0287701(+) =JcCB0171671(-) =JcCA0315721(-) =JcCB0186361(+) =JcCA0066941(+) =JcCA0264441(-) =JcPR10F8MCI(+) =JcCA0277701(-) =JcCB0465311(+) =JcCC0332622(+) =JcCB0455701(-) =JcCB0698151(+) =JcCB0545461(+) =JcCA0316711(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T4A6_RICCO 248 53.1 64.9 (tr|B9T4A6) Glutathione peroxidase OS=Ricinus communis GN=RCOM_0176350 PE=3 SV=1
Arabidopsis_pep AT2G48160.1 79.0 42.0 57.3 | Symbols: | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: PWWP domain-containing protein (TAIR:AT3G63070.1); Has 1292 Blast hits to 1135 proteins in 175 species: Archae - 2; Bacteria - 174; Metazoa - 679; Fungi - 194; Plants - 113; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). | chr2:19689784-19696584 REVERSE
soybean_pep Glyma19g33640.1 102 35.7 51.0  
Medicago_pep IMGA|Medtr1g086720.1 108 38.2 50.5 PWWP; Regulation of nuclear pre-mRNA protein chr01_pseudomolecule_IMGAG_V3 17263033-17247045 E EGN_Mt090430 20090702
grape_pep GSVIVT01011100001 155 35.9 51.5  
castor_bean_cds 28153.m000283 295 86.7 86.7 glutathione peroxidase, putative
castor_bean_pep 28153.m000283 248 53.1 64.9 glutathione peroxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06773 77.8 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0545461.10 length: 264 aa.
no_ID  
method AccNumber shortName E-value location
Seg seg seg NA 121-134