Jatropha Genome Database

JcCB0543811.10 (JcS_202622.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0543811
Scaffold:
JcS_202622 JcCB0994661(-) =JcCB0543811(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I4Z7_POPTR 214 88.0 89.7 (tr|B9I4Z7) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_422788 PE=3 SV=1
Arabidopsis_pep AT5G23250.1 209 86.3 88.0 | Symbols: | succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative | chr5:7830460-7832491 FORWARD
soybean_pep Glyma09g29460.1 213 88.9 89.7  
Medicago_pep IMGA|Medtr6g089770.1 212 87.2 88.9 CoA-binding chr06_pseudomolecule_IMGAG_V3 18694209-18699277 E EGN_Mt090430 20090702
grape_pep GSVIVT01026227001 210 85.5 89.7  
castor_bean_cds 30189.m001676 438 89.5 89.5 Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative
castor_bean_pep 30189.m001676 213 88.9 89.7 Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04995 737 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0543811.10 length: 148 aa.
IPR003781 CoA-binding
method AccNumber shortName E-value location
HMMPfam PF02629 CoA_binding 8.1e-23 9-79
HMMSmart SM00881 no description 1.1e-11 1-80
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.8e-34 13-104
superfamily SSF51735 NAD(P)-binding 6.1e-42 13-103
IPR016102 Succinyl-CoA synthetase-like
Gene3D G3DSA:3.40.50.261 no description 9.1e-13 105-145
superfamily SSF52210 Succinyl-CoA 2e-13 104-143
no_ID  
HMMPanther PTHR11117 SUCCINYL-COA 1.6e-87 16-143
Seg seg seg NA 13-26
58-69