Jatropha Genome Database

JcCB0542741.10 (JcS_200316.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0542741
Scaffold:
JcS_200316 JcCB0813871(+) =JcCB0542741(+) =JcCA0313601(+) =JcCB0121101(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5AXB4_VITVI 181 87.6 93.8 (tr|A5AXB4) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004904 PE=4 SV=1
Arabidopsis_pep AT3G16500.1 145 74.2 82.5 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor | chr3:5612801-5614208 REVERSE
soybean_pep Glyma15g02350.2 177 90.2 95.7  
Medicago_pep IMGA|Medtr2g122050.1 159 81.2 87.5 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3 29123619-29119970 E EGN_Mt090430 20090702
grape_pep GSVIVT01016972001 176 89.2 94.6  
castor_bean_cds 30146.m003502 272 86.8 86.8 Auxin-responsive protein IAA6, putative
castor_bean_pep 30146.m003502 181 89.7 93.8 Auxin-responsive protein IAA6, putative
JAT_13201ests gi|268525133|gb|FM895775.1|FM895775 575 100.0 100.0 FM895775 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002757, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0542741.10 length: 97 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 26.605 8-97
no_ID  
HMMPfam PF02309 AUX_IAA 1.9e-31 5-97