Jatropha Genome Database

JcCB0536281.10 (JcS_100121.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0536281
Scaffold:
JcS_100121 JcCA0152991(+) =JcCB0152181(-) =JcCB0203531(-) =JcCB0536281(-) =JcCB0075891(+) =JcCA0296361(+) =JcCB0102271(-) =JcCB0455011(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HA56_POPTR 192 69.5 73.8 (tr|B9HA56) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1081611 PE=4 SV=1
Arabidopsis_pep AT4G32330.3 159 60.6 68.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4728 Blast hits to 3313 proteins in 331 species: Archae - 4; Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants - 233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI BLink). | chr4:15609801-15611867 FORWARD
soybean_pep Glyma04g07100.1 167 61.6 73.2  
Medicago_pep IMGA|Medtr1g013800.1 146 59.3 68.6 Targeting for Xklp2 chr01_pseudomolecule_IMGAG_V3 2698448-2692989 E EGN_Mt090430 20090702
grape_pep GSVIVT01035857001 162 59.5 66.7  
castor_bean_cds 29848.m004627 349 90.7 90.7 conserved hypothetical protein
castor_bean_pep 29848.m004627 184 70.1 73.7 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02122 563 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0536281.10 length: 156 aa.
IPR009675 Xklp2 targeting protein
method AccNumber shortName E-value location
HMMPfam PF06886 TPX2 6.2e-24 65-121
no_ID  
Coil coil coiled-coil NA 78-99
Seg seg seg NA 127-137