Jatropha Genome Database

JcCB0535351.10 (JcS_108688.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0535351
Scaffold:
JcS_108688 JcCB0171941(-) =JcCB0535351(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RID7_RICCO 282 76.7 80.3 (tr|B9RID7) DNA-damage-inducible protein f, putative OS=Ricinus communis GN=RCOM_1578220 PE=4 SV=1
Arabidopsis_pep AT1G51340.1 254 67.7 76.0 | Symbols: | MATE efflux family protein | chr1:19032034-19034681 FORWARD
soybean_pep Glyma15g03930.1 244 66.7 74.5  
Medicago_pep IMGA|Medtr2g117440.1 243 66.1 73.4 Ribosomal protein S2; Multi antimicrobial extrusion protein MatE chr02_pseudomolecule_IMGAG_V3 27589576-27585050 F EGN_Mt090430 20090702
grape_pep GSVIVT01033317001 251 68.8 78.1  
castor_bean_cds 30169.m006452 642 89.1 89.1 DNA-damage-inducible protein f, putative
castor_bean_pep 30169.m006452 282 76.7 80.3 DNA-damage-inducible protein f, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0535351.10 length: 207 aa.
IPR002528 Multi antimicrobial extrusion protein MatE
method AccNumber shortName E-value location
Biological Process GO:0006855 multidrug transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11206 MULTIDRUG 2e-65 16-207
HMMPfam PF01554 MatE 1e-13 23-174
no_ID  
HMMPanther PTHR11206:SF3 DNA-DAMAGE-INDUCIBLE 2e-65 16-207
Seg seg seg NA 94-112
171-182