Jatropha Genome Database

JcCB0528831.10 (JcS_105038.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0528831
Scaffold:
JcS_105038 JcCB0528831(-) =JcCB0110731(+) =JcCB0052881(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SL09_RICCO 264 60.1 69.3 (tr|B9SL09) Breast cancer type 2 susceptibility protein brca2, putative OS=Ricinus communis GN=RCOM_0847980 PE=4 SV=1
Arabidopsis_pep AT5G01630.1 121 39.1 54.1 | Symbols: BRCA2B, BRCA2(V), ATBRCA2(V) | BRCA2B (BRCA2-LIKE B); protein binding / single-stranded DNA binding | chr5:235117-240911 REVERSE
soybean_pep Glyma13g11750.1 90.5 41.0 58.3  
Medicago_pep IMGA|Medtr3g106000.1 103 43.5 59.0 ; chr03_pseudomolecule_IMGAG_V3 26630653-26626568 E EGN_Mt090430 20090702
grape_pep GSVIVT01030280001 164 47.1 57.3  
castor_bean_cds 29820.m001006 281 83.7 83.7 breast cancer type 2 susceptibility protein brca2, putative
castor_bean_pep 29820.m001006 264 60.1 69.3 breast cancer type 2 susceptibility protein brca2, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0528831.10 length: 229 aa.
IPR002093 BRCA2 repeat
method AccNumber shortName E-value location
HMMPfam PF00634 BRCA2 3.5e-08 12-41
116-147
ProfileScan PS50138 BRCA2_REPEAT 9.273 114-148
IPR015525 Breast cancer type 2 susceptibility protein
HMMPanther PTHR11289 BREAST 1.2e-08 10-229
no_ID  
Seg seg seg NA 202-217