Jatropha Genome Database

JcCB0517161.10 (JcS_100433.40)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0517161
Scaffold:
JcS_100433 JcCA0267531(-) =JcCB0429441(+) =JcCD0128967(-) =JcCB0064191(+) =JcCB0517161(+) =JcCB0284631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5C9H3_VITVI 104 46.3 63.2 (tr|A5C9H3) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030925 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma16g28890.2 94.7 43.6 55.4  
Medicago_pep IMGA|Medtr6g036540.1 53.5 43.9 59.6 Zinc finger, CCHC-type chr06_pseudomolecule_IMGAG_V3 8117470-8116658 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0517161.10 length: 128 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 0.00052 42-56
61-75
HMMSmart SM00343 no description 0.025 42-58
60-76
ProfileScan PS50158 ZF_CCHC 8.614 43-56
61-75
IPR013084 Zinc finger, CCHC retroviral-type
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.60.10 no description 8.8e-06 29-80
no_ID  
HMMPanther PTHR23002 ZINC 6.3e-06 35-84
HMMPanther PTHR23002:SF11 CELLULAR 6.3e-06 35-84
Seg seg seg NA 4-12
superfamily SSF57756 Retrovirus 5.5e-10 29-80