Jatropha Genome Database

JcCB0510081.10 (JcS_100183.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0510081
Scaffold:
JcS_100183 JcCB0736301(+) =JcCA0046261(-) =JcCB0428011(+) =JcCB0510081(+) =JcCB0383651(-) =JcCB0123121(-) =JcCA0297911(+) =JcCA0306361(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D2D962_9ROSI 239 99.1 99.1 (tr|D2D962) 60S ribosomal protein L18a OS=Jatropha curcas PE=2 SV=1
Arabidopsis_pep AT1G29965.1 224 89.6 96.5 | Symbols: | 60S ribosomal protein L18A (RPL18aA) | chr1:10498458-10499373 REVERSE
soybean_pep Glyma14g03380.1 229 93.9 96.5  
Medicago_pep IMGA|Medtr2g117520.1 221 89.6 93.9 Ribosomal L18ae protein chr02_pseudomolecule_IMGAG_V3 27635062-27636702 E EGN_Mt090430 20090702
grape_pep GSVIVT01000485001 226 92.2 96.5  
castor_bean_cds 29693.m002025 355 88.0 88.0 60S ribosomal protein L18a, putative
castor_bean_pep 29693.m002025 231 96.5 98.3 60S ribosomal protein L18a, putative
JAT_13201ests gi|268522476|gb|FM894621.1|FM894621 678 100.0 100.0 FM894621 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000427, mRNA sequence
KJC_r1 KJC_c00228 680 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0510081.10 length: 118 aa.
IPR002670 Ribosomal protein L18ae
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR10052:SF1 60S 3.9e-74 4-118
IPR021138 Ribosomal protein L18ae/LX
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF01775 Ribosomal_L18ae 1.3e-30 5-67
no_ID  
HMMPanther PTHR10052 60S 3.9e-74 4-118