Jatropha Genome Database

JcCB0506361.10 (JcS_100419.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0506361
Scaffold:
JcS_100419 JcCA0225811(+) =JcCA0264101(-) =JcCA0077451(+) =JcCA0136621(-) =JcCB0506361(+) =JcCA0266291(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S2W7_RICCO 262 85.0 90.5 (tr|B9S2W7) 8-oxoguanine DNA glycosylase, putative OS=Ricinus communis GN=RCOM_0563200 PE=4 SV=1
Arabidopsis_pep AT1G21710.1 216 79.9 87.3 | Symbols: OGG1, ATOGG1 | OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1); oxidized purine base lesion DNA N-glycosylase | chr1:7624439-7625869 FORWARD
soybean_pep Glyma06g12160.1 234 76.1 88.7  
Medicago_pep IMGA|Medtr3g100560.1 202 68.3 81.3 N-glycosylase/DNA lyase, related chr03_pseudomolecule_IMGAG_V3 24115405-24112945 E EGN_Mt090430 20090702
grape_pep GSVIVT01008832001 244 80.4 84.5  
castor_bean_cds 29648.m002007 396 86.8 86.8 8-oxoguanine DNA glycosylase, putative
castor_bean_pep 29648.m002007 262 85.0 90.5 8-oxoguanine DNA glycosylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0506361.10 length: 229 aa.
IPR003265 HhH-GPD domain
method AccNumber shortName E-value location
Biological Process GO:0006284 base-excision repair    
HMMSmart SM00478 no description 0.0058 1-123
IPR011257 DNA glycosylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006281 DNA repair    
superfamily SSF48150 DNA-glycosylase 1.1e-22 2-125
no_ID  
Gene3D G3DSA:1.10.1670.10 no description 2.6e-17 47-125
HMMPanther PTHR10242 8-OXOGUANINE 1.2e-30 6-146
Seg seg seg NA 171-176