Jatropha Genome Database

JcCB0498951.10 (JcS_101957.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0498951
Scaffold:
JcS_101957 JcCB0105731(-) =JcCB0498951(+) =JcCB0355951(-) =JcCA0143731(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RVQ5_RICCO 155 82.6 89.5 (tr|B9RVQ5) 9-cis-epoxycarotenoid dioxygenase, putative OS=Ricinus communis GN=RCOM_0968760 PE=4 SV=1
Arabidopsis_pep AT3G63520.1 140 68.4 83.2 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase | chr3:23452940-23455896 FORWARD
soybean_pep Glyma12g36530.1 142 67.7 78.1  
Medicago_pep IMGA|Medtr5g025270.1 53.1 46.6 60.3 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10102084-10100345 E EGN_Mt090430 20090702
grape_pep GSVIVT01032103001 145 74.2 84.9  
castor_bean_cds 29864.m001501 165 83.3 83.3 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29864.m001501 155 82.6 89.5 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04782 775 97.3 97.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0498951.10 length: 231 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 4e-22 6-90
HMMPfam PF03055 RPE65 1.4e-08 45-90
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 4e-22 6-90