Jatropha Genome Database

JcCB0496561.10 (JcS_103389.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0496561
Scaffold:
JcS_103389 JcCA0278181(+) =JcCA0313981(-) =JcCB0496561(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl --No_Hits--        
Arabidopsis_pep AT3G23230.1 50.1 34.9 43.0 | Symbols: | ethylene-responsive factor, putative | chr3:8289647-8290066 REVERSE
soybean_pep --No_Hits--        
Medicago_pep --No_Hits--        
grape_pep --No_Hits--        
castor_bean_cds 29603.m000509 109 87.9 87.9 Ethylene-responsive transcription factor, putative
castor_bean_pep 29603.m000509 47.0 55.3 63.2 Ethylene-responsive transcription factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0496561.10 length: 104 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:3.30.730.10 no description 2e-07 1-33
HMMPfam PF00847 AP2 5.1e-05 1-23
HMMSmart SM00380 no description 0.00044 1-36
ProfileScan PS51032 AP2_ERF 11.759 1-30
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 5.2e-10 1-33
no_ID  
Seg seg seg NA 6-17
39-71
87-103