Jatropha Genome Database

JcCB0492761.10 (JcS_100318.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0492761
Scaffold:
JcS_100318 JcCB0492761(+) =JcCB0159671(-) =JcCA0092241(-) =JcCD0081914(-) =JcCD0130253(+) =JcCB0768001(+) =JcCB0432281(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RES2_RICCO 513 78.3 87.6 (tr|B9RES2) DNA-damage-repair/toleration protein DRT102, putative OS=Ricinus communis GN=RCOM_1428060 PE=4 SV=1
Arabidopsis_pep AT3G04880.1 445 68.5 79.9 | Symbols: DRT102 | DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2) | chr3:1346431-1347363 REVERSE
soybean_pep Glyma19g43230.1 446 69.9 82.8  
Medicago_pep IMGA|Medtr7g140600.1 438 70.2 81.5 Ribose/galactose isomerase; Cupin region chr07_pseudomolecule_IMGAG_V3 33895494-33891835 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 30128.m008626 311 85.6 85.6 DNA-damage-repair/toleration protein DRT102, putative
castor_bean_pep 30128.m008626 513 78.3 87.6 DNA-damage-repair/toleration protein DRT102, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03971 1641 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0492761.10 length: 322 aa.
IPR003500 Ribose/galactose isomerase
method AccNumber shortName E-value location
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.40.1400.10 no description 1.6e-26 3-145
HMMPfam PF02502 LacAB_rpiB 1.1e-31 15-146
superfamily SSF89623 Ribose/Galactose 4.9e-29 14-162
IPR011051 Cupin, RmlC-type
superfamily SSF51182 RmlC-like 9.1e-10 189-296
IPR012100 DNA-damage-repair/toleration protein, DRT102
HMMPIR PIRSF011609 DNA-damage-repair/toleration 2.2e-182 5-314
IPR013096 Cupin 2, conserved barrel
HMMPfam PF07883 Cupin_2 7.6e-06 223-280
no_ID  
Seg seg seg NA 4-11
66-74