Jatropha Genome Database

JcCB0492351.10 (JcS_100697.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0492351
Scaffold:
JcS_100697 JcCB0746411(-) =JcCB0696011(-) =JcCB0492351(+) =JcCB0534201(-) =JcCB0142761(+) =JcCD0139862(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GTK4_POPTR 474 94.8 98.3 (tr|B9GTK4) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816223 PE=3 SV=1
Arabidopsis_pep AT1G43710.1 451 89.3 94.8 | Symbols: emb1075 | emb1075 (embryo defective 1075); carboxy-lyase/ catalytic/ pyridoxal phosphate binding | chr1:16486534-16488298 REVERSE
soybean_pep Glyma08g19360.1 450 88.8 96.1  
Medicago_pep IMGA|Medtr2g008250.1 452 90.1 95.3 Pyridoxal-dependent decarboxylase; chr02_pseudomolecule_IMGAG_V3 1485157-1479953 E EGN_Mt090430 20090702
grape_pep GSVIVT01034903001 464 92.7 97.0  
castor_bean_cds 29982.m000222 940 91.9 91.9 group II plp decarboxylase, putative
castor_bean_pep 29982.m000222 469 93.6 97.9 group II plp decarboxylase, putative
JAT_13201ests gi|268526422|gb|FM895276.1|FM895276 946 99.8 99.8 FM895276 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002076, mRNA sequence
KJC_r1 KJC_c01718 1405 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0492351.10 length: 237 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 3.6e-103 73-233
HMMPfam PF00282 Pyridoxal_deC 3.7e-20 40-233
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.7e-35 1-225
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 5.3e-54 1-233
IPR021115 Pyridoxal-phosphate binding site
PatternScan PS00392 DDC_GAD_HDC_YDC NA 154-175
no_ID  
HMMPanther PTHR11999:SF4 GROUP 3.6e-103 73-233