Jatropha Genome Database

JcCB0488391.10 (JcS_200084.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0488391
Scaffold:
JcS_200084 JcCB0549911(-) =JcCB0139081(+) =JcCB0488391(-) =JcCA0289651(+) =JcCA0098341(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A9PBH0_POPTR 163 72.6 73.5 (tr|A9PBH0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_731548 PE=2 SV=1
Arabidopsis_pep AT1G07830.1 147 63.5 70.4 | Symbols: | ribosomal protein L29 family protein | chr1:2422549-2423392 FORWARD
soybean_pep Glyma04g33930.1 151 64.9 72.8  
Medicago_pep IMGA|Medtr5g015940.1 138 64.0 68.5 Ribosomal protein L29; Alpha-helical ferredoxin; Mitochondrial 39-S ribosomal L47 chr05_pseudomolecule_IMGAG_V3 5435034-5430035 E EGN_Mt090430 20090702
grape_pep GSVIVT01007807001 146 64.0 70.3  
castor_bean_cds 30147.m013992 188 85.7 85.7 structural constituent of ribosome, putative
castor_bean_pep 30147.m013992 155 73.1 75.9 structural constituent of ribosome, putative
JAT_13201ests gi|268523173|gb|FM893939.1|FM893939 293 91.5 91.5 FM893939 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004887, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0488391.10 length: 111 aa.
IPR010729 Ribosomal protein L47, mitochondrial
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005761 mitochondrial ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR21183 RIBOSOMAL 2.5e-37 1-109
HMMPfam PF06984 MRP-L47 3.7e-28 34-109
no_ID  
HMMPanther PTHR21183:SF11 39S 2.5e-37 1-109
Seg seg seg NA 13-25