Jatropha Genome Database

JcCB0478521.10 (JcS_101948.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0478521
Scaffold:
JcS_101948 JcCB0101161(-) =JcCB0478521(+) =JcCB0157621(+) =JcCA0307901(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N7E1_POPTR 462 81.8 90.0 (tr|B9N7E1) Lipoxygenase OS=Populus trichocarpa GN=POPTRDRAFT_828417 PE=3 SV=1
Arabidopsis_pep AT1G17420.1 418 80.7 90.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | chr1:5977512-5981384 FORWARD
soybean_pep Glyma07g04480.1 457 87.7 94.2  
Medicago_pep IMGA|Medtr8g025120.2 444 84.8 92.6 Plant lipoxygenase; Lipase/lipooxygenase, PLAT/LH2 chr08_pseudomolecule_IMGAG_V3 4933070-4926941 E EGN_Mt090430 20090702
grape_pep GSVIVT01016738001 445 82.7 94.7  
castor_bean_cds 29468.m000030 422 84.7 84.7 lipoxygenase, putative
castor_bean_pep 29851.m002424 355 67.8 84.5 lipoxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0478521.10 length: 281 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
HMMPanther PTHR11771 LIPOXYGENASE 2.2e-159 39-281
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00468 PLTLPOXGNASE 3e-17 67-86
134-158
IPR013819 Lipoxygenase, C-terminal
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00087 LIPOXYGENASE 1.8e-20 179-196
197-214
217-237
HMMPfam PF00305 Lipoxygenase 1.5e-98 39-281
ProfileScan PS51393 LIPOXYGENASE_3 114.033 1-281
superfamily SSF48484 Lipoxigenase 6.8e-93 39-281
IPR020833 Lipoxygenase, iron binding site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00711 LIPOXYGENASE_1 NA 197-211
IPR020834 Lipoxygenase, conserved site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00081 LIPOXYGENASE_2 NA 224-234
no_ID  
Gene3D G3DSA:1.20.245.10 no description 2.2e-31 194-281
Gene3D G3DSA:3.10.450.60 no description 1.7e-49 60-193
Gene3D G3DSA:4.10.372.10 no description 5.8e-07 39-59
HMMPanther PTHR11771:SF2 LIPOXYGENASE 2.2e-159 39-281