Jatropha Genome Database

JcCB0470521.10 (JcS_101935.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0470521
Scaffold:
JcS_101935 JcPR04HILCK(+) =JcCB0470521(-) =JcCA0242371(+) =JcCB0366321(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q8S2V5_MEDTR 125 77.9 83.1 (tr|Q8S2V5) Small G-protein ROP3 OS=Medicago truncatula PE=2 SV=1
Arabidopsis_pep AT2G17800.2 115 77.9 84.4 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1; GTP binding | chr2:7740313-7741942 FORWARD
soybean_pep Glyma04g02530.1 119 77.9 83.1  
Medicago_pep IMGA|Medtr4g098540.1 125 77.9 83.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21246015-21242846 F EGN_Mt090430 20090702
grape_pep GSVIVT01024029001 120 93.4 95.1  
castor_bean_cds 30170.m014385 248 88.4 88.4 rac gtpase, putative
castor_bean_pep 30170.m014385 114 79.2 84.4 rac gtpase, putative
JAT_13201ests gi|268525702|gb|FM890957.1|FM890957 143 86.0 86.0 FM890957 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000928, mRNA sequence
KJC_r1 KJC_c00209 143 86.0 86.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0470521.10 length: 86 aa.
IPR003578 Small GTPase, Rho type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 0.0013 4-69
IPR013753 Ras
HMMPfam PF00071 Ras 4.9e-05 24-67
no_ID  
Gene3D G3DSA:3.40.50.300 no description 0.00022 19-74
HMMPanther PTHR11708 RAS-RELATED 3.9e-42 11-79
HMMPanther PTHR11708:SF295GTPASE PROTEIN 3.9e-42 11-79
Seg seg seg NA 71-78
superfamily SSF52540 P-loop 7.4e-10 19-81