Jatropha Genome Database

JcCB0458291.10 (JcS_100048.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0458291
Scaffold:
JcS_100048 JcCD0125670(-) =JcCD0183850(-) =JcCB0689361(-) =JcCA0122321(+) =JcCB0580691(+) =JcCA0027271(-) =JcCA0009771(+) =JcCB0075691(+) =JcCB0458291(+) =JcCB0097211(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R705_RICCO 237 75.3 85.7 (tr|B9R705) Voltage-dependent anion-selective channel, putative OS=Ricinus communis GN=RCOM_1587520 PE=4 SV=1
Arabidopsis_pep AT5G67500.1 181 55.7 72.5 | Symbols: VDAC2, ATVDAC2 | VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel | chr5:26935223-26937123 FORWARD
soybean_pep Glyma0092s00210.1 212 68.5 80.5  
Medicago_pep IMGA|Medtr1g023130.1 208 64.6 77.6 Porin, eukaryotic type chr01_pseudomolecule_IMGAG_V3 5043912-5042296 E EGN_Mt090430 20090702
grape_pep GSVIVT01000122001 196 62.8 76.4  
castor_bean_cds 30170.m013741 155 79.4 79.4 voltage-dependent anion-selective channel, putative
castor_bean_pep 30170.m013741 237 75.3 85.7 voltage-dependent anion-selective channel, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0458291.10 length: 160 aa.
IPR001925 Porin, eukaryotic type
method AccNumber shortName E-value location
Cellular Component GO:0005741 mitochondrial outer membrane    
Biological Process GO:0006820 anion transport    
Molecular Function GO:0008308 voltage-gated anion channel activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01459 Porin_3 4.7e-31 11-153
PatternScan PS00558 EUKARYOTIC_PORIN NA 103-125
no_ID  
HMMPanther PTHR11743 VOLTAGE-DEPENDENT 3.2e-66 12-160
HMMPanther PTHR11743:SF14 VOLTAGE-DEPENDENT 3.2e-66 12-160