Jatropha Genome Database

JcCB0456101.10 (JcS_101482.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0456101
Scaffold:
JcS_101482 JcCD0051435(+) =JcCA0042101(-) =JcCB0456101(+) =JcCB0163231(-) =JcCB0599321(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RGE0_RICCO 438 78.1 88.3 (tr|B9RGE0) Short chain alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_1453330 PE=3 SV=1
Arabidopsis_pep AT1G52340.1 375 69.4 80.6 | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase | chr1:19489997-19491527 REVERSE
soybean_pep Glyma11g21160.1 380 69.1 81.1  
Medicago_pep IMGA|Medtr3g021580.1 363 66.4 78.5 Short-chain dehydrogenase/reductase SDR chr03_pseudomolecule_IMGAG_V3 5408604-5411581 E EGN_Mt090430 20090702
grape_pep GSVIVT01036069001 256 50.0 65.5  
castor_bean_cds 29588.m000888 460 82.8 82.8 short chain alcohol dehydrogenase, putative
castor_bean_pep 30131.m007229 438 78.1 88.3 short chain alcohol dehydrogenase, putative
JAT_13201ests gi|268521752|gb|FM894348.1|FM894348 1213 100.0 100.0 FM894348 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004681, mRNA sequence
KJC_r1 KJC_c08803 924 98.8 98.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0456101.10 length: 265 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 2.9e-12 78-89
133-141
153-172
HMMPanther PTHR19410 SHORT-CHAIN 3.9e-132 1-252
HMMPfam PF00106 adh_short 9.6e-27 4-171
IPR002347 Glucose/ribitol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00081 GDHRDH 9.6e-38 5-22
78-89
127-143
153-172
174-191
218-238
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 9.6e-65 3-261
superfamily SSF51735 NAD(P)-binding 1.2e-69 2-261
no_ID  
HMMPanther PTHR19410:SF80 SHORT 3.9e-132 1-252
Seg seg seg NA 133-147