Jatropha Genome Database

JcCB0454891.10 (JcS_100099.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0454891
Scaffold:
JcS_100099 JcCB0837721(+) =JcCB0279501(+) =JcCB0172651(-) =JcCB0454891(-) =JcCB0101331(-) =JcCB0003261(-) =JcCB0359161(-) =JcCB0286011(-) =JcCB0143411(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SUG9_RICCO 329 68.9 77.5 (tr|B9SUG9) Cell cycle checkpoint protein rad17, putative OS=Ricinus communis GN=RCOM_0572470 PE=4 SV=1
Arabidopsis_pep AT5G66130.1 249 54.1 66.0 | Symbols: ATRAD17, RAD17 | ATRAD17 (ARABIDOPSIS THALIANA RADIATION SENSITIVE) | chr5:26434236-26437091 FORWARD
soybean_pep Glyma16g23360.1 248 54.3 68.3  
Medicago_pep IMGA|Medtr8g089430.1 261 55.8 69.2 Checkpoint protein Rad24 chr08_pseudomolecule_IMGAG_V3 19216485-19222914 E EGN_Mt090430 20090702
grape_pep GSVIVT01018736001 287 58.4 73.3  
castor_bean_cds 29656.m000473 476 84.5 84.5 cell cycle checkpoint protein rad17, putative
castor_bean_pep 29656.m000473 329 68.9 77.5 cell cycle checkpoint protein rad17, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0454891.10 length: 260 aa.
IPR004582 Checkpoint protein Rad24
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006281 DNA repair    
Biological Process GO:0007049 cell cycle    
HMMPanther PTHR12172 CELL 8e-38 17-230
no_ID  
Gene3D G3DSA:1.10.8.60 no description 6.9e-05 124-167
HMMPfam PF03215 Rad17 8e-25 16-230
Seg seg seg NA 47-57
177-184
superfamily SSF52540 P-loop 4.1e-07 48-170