Jatropha Genome Database

JcCB0453831.10 (JcS_100108.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0453831
Scaffold:
JcS_100108 JcCD0183258(+) =JcCB0453831(-) =JcCB0080951(+) =JcCB0078661(-) =JcCB0336251(-) =JcCA0307531(+) =JcCB0569231(-) =JcPR11GWW51(-) =JcCB0824821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RH88_RICCO 315 71.7 80.2 (tr|B9RH88) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1448750 PE=4 SV=1
Arabidopsis_pep AT4G39140.5 197 48.6 62.4 | Symbols: | protein binding / zinc ion binding | chr4:18229637-18231282 REVERSE
soybean_pep Glyma06g01220.2 244 60.5 71.9  
Medicago_pep IMGA|Medtr8g040350.1 231 53.1 69.0 Zinc finger, RING-type chr08_pseudomolecule_IMGAG_V3 8635076-8640562 E EGN_Mt090430 20090702
grape_pep GSVIVT01033378001 84.3 34.2 49.0  
castor_bean_cds 30131.m007080 525 85.8 85.8 ubiquitin-protein ligase, putative
castor_bean_pep 30131.m007080 315 71.7 80.2 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0453831.10 length: 212 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 no description 2.1e-05 46-104
ProfileScan PS50089 ZF_RING_2 11.162 46-105
no_ID  
Seg seg seg NA 31-40
158-176
superfamily SSF57850 RING/U-box 6.3e-09 41-120