Jatropha Genome Database

JcCB0453091.10 (JcS_102574.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0453091
Scaffold:
JcS_102574 JcCB0711881(+) =JcCB0543221(-) =JcCB0453091(+) =JcCA0312091(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9FSJ2_HEVBR 120 93.2 96.6 (tr|Q9FSJ2) Superoxide dismutase (Fragment) OS=Hevea brasiliensis GN=sod PE=2 SV=1
Arabidopsis_pep AT3G10920.1 105 85.5 92.7 | Symbols: MSD1, MEE33, ATMSD1 | MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); metal ion binding / superoxide dismutase | chr3:3418015-3419581 FORWARD
soybean_pep Glyma04g39930.1 111 91.1 91.1  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01032675001 112 89.5 93.0  
castor_bean_cds 29729.m002354 234 92.0 92.0 superoxide dismutase [mn], putative
castor_bean_pep 29729.m002354 120 93.2 94.9 superoxide dismutase [mn], putative
JAT_13201ests gi|268525649|gb|FM890904.1|FM890904 353 100.0 100.0 FM890904 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000863, mRNA sequence
KJC_r1 KJC_c00635 353 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0453091.10 length: 60 aa.
IPR001189 Manganese/iron superoxide dismutase
method AccNumber shortName E-value location
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPanther PTHR11404 SUPEROXIDE 1.6e-34 3-55
IPR019832 Manganese/iron superoxide dismutase, C-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF02777 Sod_Fe_C 1.2e-20 12-53
superfamily SSF54719 Fe,Mn 8.6e-17 12-59
IPR019833 Manganese/iron superoxide dismutase, binding site
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00088 SOD_MN NA 19-26
no_ID  
HMMPanther PTHR11404:SF5 SUPEROXIDE 1.6e-34 3-55