Jatropha Genome Database

JcCB0433251.20 (JcS_109377.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0433251
Scaffold:
JcS_109377 JcCB0288671(-) =JcCB0433251(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S2X4_RICCO 234 90.2 97.5 (tr|B9S2X4) Replication factor C / DNA polymerase III gamma-tau subunit, putative OS=Ricinus communis GN=RCOM_0563570 PE=4 SV=1
Arabidopsis_pep AT1G77470.1 203 73.1 86.2 | Symbols: | replication factor C 36 kDA, putative | chr1:29112194-29114323 REVERSE
soybean_pep Glyma06g11980.1 224 85.1 95.0  
Medicago_pep IMGA|Medtr3g100750.1 209 82.1 95.5 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24245152-24251862 F EGN_Mt090430 20090702
grape_pep GSVIVT01008841001 216 88.3 96.4  
castor_bean_cds 29648.m002014 448 90.4 90.4 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 29648.m002014 234 90.2 97.5 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0433251.20 length: 122 aa.
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 1.5e-24 23-116
IPR013748 Replication factor C
Molecular Function GO:0003689 DNA clamp loader activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005663 DNA replication factor C complex    
Biological Process GO:0006260 DNA replication    
HMMPfam PF08542 Rep_fac_C 1.5e-24 21-110
no_ID  
Gene3D G3DSA:1.20.272.10 no description 3.1e-20 23-116