Jatropha Genome Database

JcCB0432331.10 (JcS_100073.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0432331
Scaffold:
JcS_100073 JcCB0251321(-) =JcCA0288061(-) =JcCB0432331(+) =JcCB0229931(+) =JcCA0012252(-) =JcCB0687271(+) =JcCB0339751(-) =JcCB0763531(+) =JcCB0332961(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5AI98_VITVI 168 78.4 81.0 (tr|A5AI98) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007742 PE=3 SV=1
Arabidopsis_pep AT4G02610.1 160 72.4 81.0 | Symbols: | tryptophan synthase, alpha subunit, putative | chr4:1147662-1149217 FORWARD
soybean_pep Glyma19g34350.1 167 78.3 82.6  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01000716001 168 78.4 81.0  
castor_bean_cds 29883.m001987 228 91.4 91.4 trytophan synthase alpha subunit, putative
castor_bean_pep 29883.m001987 151 77.1 82.9 trytophan synthase alpha subunit, putative
JAT_13201ests gi|268518068|gb|FM893443.1|FM893443 381 100.0 100.0 FM893443 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_004231, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0432331.10 length: 110 aa.
IPR002028 Tryptophan synthase, alpha chain
method AccNumber shortName E-value location
Molecular Function GO:0004834 tryptophan synthase activity    
Biological Process GO:0006568 tryptophan metabolic process    
HMMPfam PF00290 Trp_syntA 1.7e-27 7-108
IPR011060 Ribulose-phosphate binding barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF51366 Ribulose-phoshate 9.9e-29 9-110
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 3.3e-24 9-108
no_ID  
HMMPanther PTHR10314 SER/THR 7.5e-18 9-110
HMMPanther PTHR10314:SF4 TRYTOPHAN 7.5e-18 9-110