Jatropha Genome Database

JcCB0429031.10 (JcS_101039.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0429031
Scaffold:
JcS_101039 JcCB0126561(+) =JcCA0281391(-) =JcCB0287791(-) =JcCB0429031(+) =JcCA0263611(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SNV7_RICCO 330 52.0 63.1 (tr|B9SNV7) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_1279300 PE=3 SV=1
Arabidopsis_pep AT5G46740.1 195 55.4 65.6 | Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin thiolesterase/ ubiquitin-specific protease | chr5:18965410-18968492 REVERSE
soybean_pep Glyma09g33740.1 228 63.6 79.0  
Medicago_pep IMGA|Medtr5g030130.2 205 58.4 73.0 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 chr05_pseudomolecule_IMGAG_V3 12623520-12620068 E EGN_Mt090430 20090702
grape_pep GSVIVT01013154001 190 69.3 80.7  
castor_bean_cds 30054.m000829 250 80.4 80.4 conserved hypothetical protein
castor_bean_pep 30054.m000829 330 52.0 63.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0429031.10 length: 397 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 4.8e-24 221-358
ProfileScan PS50235 UCH_2_3 14.629 221-397
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 222-237
no_ID  
HMMPanther PTHR10420 UBIQUITIN 6.3e-67 196-396
HMMPanther PTHR10420:SF51 UBIQUITIN-SPECIFIC 6.3e-67 196-396
Seg seg seg NA 112-120
156-169
superfamily SSF54001 Cysteine 2.1e-40 215-396